Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGAGGTCAGTGT
((((((((....(((((((...&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317741
GeneSymbolSH3BGR
Binding site10,26
Score0.846
Seed1
Au0.364
Energy-18.8
Binding len16
Me-12.408
Phylopstem-0.6841744999999999
Phylopflank-0.9876678857142857
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure