Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTAAGACCACCTTAGTAGACAGTTTCTCCCCAGAAAGCCAGGCAGTA
.((((.((.(((((((((.(((&.))).)))))))))..)).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317747
GeneSymbolTRAT1
Binding site472,520
Score0.962
Seed0
Au0.544
Energy-24.1
Binding len24
Me-6.751
Phylopstem0.3528563777777778
Phylopflank0.8304004675
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure