Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGTGAATGTGCCGGGC
.(((((((((..(((((((...&)))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001317748
GeneSymbolMATN2
Binding site1127,1147
Score0.846
Seed1
Au0.426
Energy-17.5
Binding len20
Me-9.965
Phylopstem2.142669888888889
Phylopflank2.71789058125
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure