Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGTCCCGGAAAGAGGCA
.....(((.(((((((((..(.&)..))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317769
GeneSymbolSTAP1
Binding site627,644
Score1.0
Seed0
Au0.544
Energy-18.5
Binding len17
Me-14.722
Phylopstem2.564816
Phylopflank2.18022056125
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure