Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCAGTTTAAGTTGCCATGCTGCTAGGA
.(((((((.....(((((((((&)))))))))................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001317805
GeneSymbolTRAM1
Binding site3086,3119
Score0.846
Seed1
Au0.618
Energy-16.9
Binding len33
Me-13.553
Phylopstem0.5277797111111111
Phylopflank1.0304579524999995
Longest consecutive pairings9
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure