Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGCCAAGCAGGTGTGCCGGGC
.((((((((((..(((......&.))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001347722
GeneSymbolDYRK1A
Binding site7558,7581
Score0.923
Seed1
Au0.397
Energy-20.4
Binding len16
Me-8.429
Phylopstem-0.77082816
Phylopflank-0.39680632612500005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure