Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCACGCAAGCCGGAGCGGCGGGCTGACGTTGGACGAGCTGCCAGGTA
((((((((..((((((......&.)))))).......)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001317843
GeneSymbolVSTM2A
Binding site36,85
Score0.846
Seed1
Au0.309
Energy-18.1
Binding len23
Me-6.236
Phylopstem1.359306875
Phylopflank1.22339579875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure