Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAACTGAGTATCTTCAGTGT
(((((((((..((((((((...&))))))))..)))).....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001317911
GeneSymbolPPM1L
Binding site9258,9283
Score0.923
Seed1
Au0.559
Energy-22.4
Binding len25
Me-8.005
Phylopstem0.23086622892857142
Phylopflank0.17488653899999995
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end5
Position3UTR
2D Structure