Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCAAACAGCTGCAGCAGGAGTGTGAGCAGCTGCAGA
((((((((((((((((..(((&)))..))))))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426673
GeneSymbolSIK3
Binding site352,389
Score0.923
Seed1
Au0.471
Energy-21.5
Binding len37
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure