Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGTCAACCCGCTGCT
..(((((.(.(((((..((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426686
GeneSymbolBACE1
Binding site2925,2944
Score0.923
Seed0
Au0.441
Energy-19.9
Binding len19
Me-8.746
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure