Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTGTTGGTTGCCAGT
..((((((..(((((((((...&)))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318029
GeneSymbolCCKBR
Binding site867,885
Score0.808
Seed1
Au0.515
Energy-19.3
Binding len18
Me-7.256
Phylopstem4.701290333333334
Phylopflank4.1374023025
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure