Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTGACCTGCCTTGGGGAGCAGGGCTGAGGGG
...((((.(((((((((((..&.)))))....)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001318049
GeneSymbolSDR16C5
Binding site1554,1587
Score1.0
Seed0
Au0.382
Energy-23.6
Binding len21
Me-8.828
Phylopstem-0.4070551866666668
Phylopflank-0.18554502749999993
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure