Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCGGGAAGCTGGAGCCACAAGAGTGC
(((((((((((((((((((...&)))))))))...))))))).....))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318050
GeneSymbolSDR16C5
Binding site380,408
Score0.846
Seed1
Au0.456
Energy-22.5
Binding len28
Me-3.938
Phylopstem0.12380959999999999
Phylopflank0.29761964625000004
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure