Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGAGGGGCTTGGCTAGGTAGTTCTGTGTGGCGGTGGTCA
.((((((((..((((((((..&))))))))........................)))).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001318162
GeneSymbolCPSF4
Binding site1098,1140
Score0.846
Seed1
Au0.456
Energy-23.9
Binding len42
Me-7.861
Phylopstem-0.04112787499999999
Phylopflank0.13898818249999995
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end6
Position3UTR
2D Structure