Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCTAGGCCAGGCTAGTGA
((((((((....(((((((((.&)))))))))...)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318203
GeneSymbolVTI1A
Binding site3020,3041
Score0.846
Seed1
Au0.485
Energy-24.6
Binding len21
Me-12.408
Phylopstem-0.8898580777777778
Phylopflank-0.19581236375
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure