Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCAGGGGATGGAGTCAGTGA
((((((((((.((((..((...&))..)))).)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318203
GeneSymbolVTI1A
Binding site1268,1288
Score0.846
Seed1
Au0.471
Energy-23.1
Binding len20
Me-6.995
Phylopstem0.70493541
Phylopflank0.94932304375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure