Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCATTGCTAGCCAGGG
.((((((.(((((((((.....&))))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318207
GeneSymbolTMEM239
Binding site2781,2798
Score0.923
Seed1
Au0.456
Energy-19.7
Binding len17
Me-6.107
Phylopstem0.189843012
Phylopflank0.03383027174999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure