Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGGGCAGAGGTAGAAAGGCAGG
..(((.(((((((((((((...&)))))))))))...........)).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318242
GeneSymbolTBATA
Binding site136,165
Score0.923
Seed0
Au0.441
Energy-23.4
Binding len29
Me-6.858
Phylopstem0.5554632833333334
Phylopflank-0.040693977500000034
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end5
Position5UTR
2D Structure