Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTAGACACTGCCTTTGGTGATACCCTAAACCAAAGGGGCCAGTC
.((((((((((((((((((...&)))))))...........................))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318250
GeneSymbolQPRT
Binding site1252,1298
Score0.846
Seed1
Au0.485
Energy-25.6
Binding len46
Me-3.793
Phylopstem-0.04897950666666669
Phylopflank-0.05443160150000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure