Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCACCAACGAGTCGCAGAAGTCCCGGGCAGAGCTGGTGG
(((((((((...((((((....&.))))))..))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318332
GeneSymbolLHPP
Binding site194,236
Score0.846
Seed1
Au0.382
Energy-22.3
Binding len19
Me-11.352
Phylopstem4.294605111111112
Phylopflank2.7592978649999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure