Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACAGTAACTGCCAGGG
.(((((((.....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318372
GeneSymbolPCDH9
Binding site2309,2328
Score1.0
Seed1
Au0.529
Energy-18.5
Binding len19
Me-13.553
Phylopstem2.4271871428571425
Phylopflank2.9810235800000005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure