Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACAGTAACTGCCAGGG
.(((((((.....((((((...&)))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318374
GeneSymbolPCDH9
Binding site2309,2328
Score0.923
Seed1
Au0.529
Energy-18.5
Binding len19
Me-13.553
Phylopstem-0.14803385714285716
Phylopflank0.029458144624999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure