Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTATTACTCTAATTATAAGAATGCCAGGTT
(((((((((.....((((((((&))))))))................))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318374
GeneSymbolPCDH9
Binding site16907,16941
Score0.846
Seed1
Au0.706
Energy-17.7
Binding len34
Me-13.498
Phylopstem0.2788739555555556
Phylopflank0.5419239150000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure