Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGGAGGTTTAGGA
....((((.((((((((((..&)))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001318374
GeneSymbolPCDH9
Binding site26638,26653
Score0.846
Seed0
Au0.647
Energy-21.3
Binding len15
Me-10.603
Phylopstem5.26249029
Phylopflank5.481589749999998
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure