Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTGTGTGGCCAGGG
.((((((.((((..((......&))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047426858
GeneSymbolTRPM5
Binding site106,121
Score0.846
Seed1
Au0.338
Energy-17.4
Binding len15
Me-8.253
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure