Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGGAGCCC
....(((((((..((((((...&))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318470
GeneSymbolTSC22D3
Binding site85,99
Score0.846
Seed0
Au0.294
Energy-23.5
Binding len14
Me-14.182
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure