Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTGGGCCGTGCTGCAGA
(((((((.((((((...(((.&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426858
GeneSymbolTRPM5
Binding site1806,1826
Score0.923
Seed1
Au0.338
Energy-23.3
Binding len20
Me-7.22
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure