Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTAGACACCCGGGATTCTGCTGCCAGGG
.(((((((......(((((.((&.)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318479
GeneSymbolTSKU
Binding site1050,1082
Score0.846
Seed1
Au0.382
Energy-16.9
Binding len17
Me-14.41
Phylopstem0.48081785714285713
Phylopflank1.56757804875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure