Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCATGAGAGGGAAGGAAACAAGCCAGA
..((((((((((((..(((...&)))..))))))..........)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318505
GeneSymbolHERC3
Binding site381,409
Score0.808
Seed1
Au0.471
Energy-20.8
Binding len28
Me-5.925
Phylopstem3.200110227272727
Phylopflank3.9744220749999997
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end3
PositionCDS
2D Structure