Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCTGGGTTTTTCAGAGGGAGCAGCCTGTGG
(((.((((((((((((((((((&)))))).........))))))).).)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318507
GeneSymbolCTU2
Binding site566,600
Score0.846
Seed0
Au0.441
Energy-23.8
Binding len34
Me-6.97
Phylopstem1.2437379379310347
Phylopflank0.27695395375
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure