Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACCAGGAAGAAATGGGGAAAAAGGGAGCCAA
...((((((((((((.(((((.&))))).))))..............)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318751
GeneSymbolCOL21A1
Binding site2916,2949
Score0.827
Seed0
Au0.485
Energy-23.0
Binding len33
Me-6.748
Phylopstem2.5423499076923073
Phylopflank4.52836073625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure