Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAACAGAACAACCGGGAGACAGC
..(((.(((((((((((((...&))))))))..........))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318751
GeneSymbolCOL21A1
Binding site1537,1565
Score0.846
Seed0
Au0.544
Energy-21.2
Binding len28
Me-6.858
Phylopstem3.2814679378260867
Phylopflank2.7503705485
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure