Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGGACAAAGGAAATCAAGGTGAAAAAGGTATTCAGGGTCA
.(((((((..(((((..((((&.))))...)))))...))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001318751
GeneSymbolCOL21A1
Binding site2396,2438
Score1.0
Seed1
Au0.588
Energy-22.8
Binding len24
Me-6.325
Phylopstem1.6154997142857142
Phylopflank2.48246580125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure