Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAACAGAACAACCGGGAGACAGC
..(((.(((((((((((((...&))))))))..........))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318752
GeneSymbolCOL21A1
Binding site1427,1455
Score0.923
Seed0
Au0.544
Energy-21.2
Binding len28
Me-6.858
Phylopstem3.327595587391305
Phylopflank2.7322861642499996
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure