Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTACTCATTTACTACAGTGTCTCAGCCTTGATAAGGGGCAGTGG
((((.(((((((((.(((((((&.)))..)))).)).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318754
GeneSymbolCOL21A1
Binding site1710,1754
Score0.846
Seed0
Au0.529
Energy-21.9
Binding len26
Me-8.792
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure