Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATCCTGTGCCAGGG
.(((((((((..((((......&))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318763
GeneSymbolATAT1
Binding site1887,1903
Score1.0
Seed1
Au0.559
Energy-20.0
Binding len16
Me-9.965
Phylopstem0.2307956666666667
Phylopflank0.10867089124999997
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure