Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGACTTACAGCAGGATGCCAGGC
.((((((((....(((((....&.))))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318810
GeneSymbolSLITRK3
Binding site3594,3617
Score0.846
Seed1
Au0.471
Energy-18.5
Binding len20
Me-12.497
Phylopstem5.113555100000001
Phylopflank5.290764805
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure