Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCCTAGGAAGTGAGCAGTT
.(((.(((((((((((((.(((&)))))))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318810
GeneSymbolSLITRK3
Binding site3195,3216
Score0.949
Seed0
Au0.471
Energy-22.9
Binding len21
Me-7.912
Phylopstem3.964183642857143
Phylopflank4.9557476225
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure