Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACTGCAGAAAGGAGAGGTGG
((((..(((((((((((((...&))).)))))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318813
GeneSymbolTTC9C
Binding site171,191
Score1.0
Seed0
Au0.529
Energy-22.2
Binding len20
Me-9.958
Phylopstem0.33296981428571426
Phylopflank-0.030051198750000063
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure