Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATTGCTGTAGCTAGGTA
(((((((.((((..(((((...&)))))...))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDXM_047426935
GeneSymbolFADS1
Binding site3004,3024
Score0.923
Seed1
Au0.618
Energy-17.7
Binding len20
Me-8.397
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure