Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGCTGCATGCCAGGTA
((((((((.....(((((..((&))..))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318825
GeneSymbolHEXA
Binding site4342,4360
Score0.846
Seed1
Au0.485
Energy-17.5
Binding len18
Me-13.697
Phylopstem1.238212375
Phylopflank2.8902937596249996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure