Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTTAGAGAAATGGCCCAGAAAGCCAGGGAGAGAAGAGCTGGG
..(((((((((((((((((...&.))))))))))............))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318844
GeneSymbolSNW1
Binding site998,1040
Score0.923
Seed1
Au0.515
Energy-24.4
Binding len31
Me-4.957
Phylopstem5.274015620689656
Phylopflank5.2028484625
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end5
PositionCDS
2D Structure