Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCTCAGGCTGCAT
.((((((((.((((((.....&)))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426959
GeneSymbolCAPRIN1
Binding site1107,1124
Score0.923
Seed1
Au0.456
Energy-20.9
Binding len17
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure