Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGATGGCCGCTTCTGTAC
.(((((..((((((((..((.&))..))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426959
GeneSymbolCAPRIN1
Binding site2970,2990
Score0.923
Seed0
Au0.647
Energy-20.5
Binding len20
Me-7.651
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure