Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATTGTAATTGTGAGATGCGGCTGTAACAAGTTGCTGGGG
.(((((((((((((((((....&)))))))))).........................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001318915
GeneSymbolLSAMP
Binding site2392,2435
Score0.846
Seed1
Au0.471
Energy-19.7
Binding len43
Me-3.793
Phylopstem0.3915942976190475
Phylopflank-0.007005531249999988
Longest consecutive pairings10
Position of longest consecutive pairings33
Pairings in 3prime end4
Position3UTR
2D Structure