Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACCTAAGAGAAAAAAAAAGAAAAAAAACAGGAAGGAGTTT
....((((((((((((((((((&))))))........................)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318915
GeneSymbolLSAMP
Binding site7248,7291
Score0.923
Seed0
Au0.632
Energy-21.7
Binding len43
Me-9.547
Phylopstem0.8863100071428566
Phylopflank0.49911584500000006
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure