Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAAACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGT
(((((((((((((((((((((.&))))))))))..........................))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318927
GeneSymbolRPE
Binding site780,829
Score0.846
Seed1
Au0.544
Energy-28.7
Binding len49
Me-3.938
Phylopstem5.394734345833335
Phylopflank3.17030720375
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end7
Position3UTR
2D Structure