Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCAACTGGTATACAGGCTGCT
..(((((((((((((.((((.&)))).)))))).....))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDXM_047426966
GeneSymbolMMP8
Binding site1137,1162
Score0.923
Seed1
Au0.574
Energy-18.9
Binding len25
Me-5.19
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure