Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCTCAGAAACGTTCTCTTGATCGGTGAAACCATAAGGAGCCCAGTGT
(((((((((((((((((((((.&))))))))))..........................))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001318929
GeneSymbolRPE
Binding site678,727
Score0.923
Seed1
Au0.544
Energy-28.7
Binding len49
Me-3.938
Phylopstem3.4393879770833347
Phylopflank2.5704415475000006
Longest consecutive pairings10
Position of longest consecutive pairings39
Pairings in 3prime end7
Position3UTR
2D Structure