Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTTGCCCAGGCCCTCCTGGGAGGGGGACAGGCATTGTTGCCAGGG
.(((((((.(((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001319
GeneSymbolCSNK1G2
Binding site2237,2284
Score0.846
Seed1
Au0.294
Energy-22.4
Binding len16
Me-4.85
Phylopstem-0.26459285714285713
Phylopflank0.011286122149999966
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure